BIOLOGY FOR BIOINFORMATICS
cod. 19171

Academic year 2008/09
2° year of course - Second semester
Professor
Academic discipline
Biochimica (BIO/10)
Field
Ambito aggregato per crediti di sede
Type of training activity
Hub-specific activity
40 hours
of face-to-face activities
5 credits
hub:
course unit
in - - -

Learning objectives

A foundation in genetics, biochemistry and molecular biology. Preparation for bio-information technology studies.

Prerequisites

- - -

Course unit content

o The components of living matter <br />
o Macromolecules: chemical and biological aspects. <br />
 Sugars <br />
 Lipids <br />
 Nucleic acids and proteins as the archives of biological diversity. <br />
o The cell <br />
 Cell membranes and membrane proteins. <br />
 Prokaryotic cells and eukaryotic cells. The structural and functional organisation of the eukaryotic cells: organelles. <br />
 The nucleus: storage and transmission of genetic information. <br />
 Ribosomes, endoplasmic reticulum, the Golgi apparatus: the biosynthesis and distribution of proteins. <br />
 Mitochondria and chloroplasts: energy transformation. <br />
 Chromosomes, the cell cycle, cell division. <br />
 Mitosis and meiosis <br />
o Nucleic acids, information and inheritance <br />
 Mendel’s experiments and the laws regulating the transmission of genetic characters <br />
 Morgan’s experiments and gene mapping. <br />
 The structure and nomenclature of nitrogenous bases and nucleotides. The covalent skeleton of nucleic acids. <br />
 The double helix structure of DNA. <br />
 DNA denaturation, renaturation and hybridisation. The electrophoretic analysis of nucleic acids. <br />
 DNA replication: fundamental characteristics and chemical foundations. DNA polymerases and other replication proteins. Replication mechanisms. <br />
 DNA sequencing. The polymerase chain reaction (PCR). DNA recombination and repair (overview). <br />
 RNA: structure and functions. The DNA-dependent synthesis of RNA (transcription). RNA polymerase and promoters. Transcription factors. Modifications of RNA after transcription. <br />
 The genetic code. Protein synthesis. <br />
 Levels of regulation of gene expression. <br />
 The RNA-dependent synthesis of DNA (inverse transcriptase). <br />
 Genes and genomes. DNA organisation in viruses, bacteria and eukaryotes. <br />
 Molecular evolution. <br />
o Proteins <br />
 The twenty amino-acids present in proteins. The peptide bond. <br />
 The protein structural hierarchy: primary, secondary, tertiary and quaternary structure. <br />
 Denaturation and folding of polypeptide chains. Covalent protein modification: phosphorylation, glycosylation, proteolysis. <br />
 The relationship between protein structure and their function. <br />
 Membrane proteins, fibrous proteins, globular proteins. <br />
o Enzymes, enzymatic catalysts and metabolism <br />
 Thermodynamic principles of enzymatic reactions <br />
 General characteristics and nomenclature of enzymes <br />
 Characteristics of enzymatic catalysis <br />
 Enzyme inhibitors <br />
 Glycolysis <br />
 Aerobic and anaerobic energetic metabolism <br />
 The energetic role of ATP and NADH <br />
 The citric acid cycle <br />
 The respiration chain <br />
 

Full programme

- - -

Bibliography

Purves, Sadawa, Orians, Heller. Elementi di Biologia e Genetica (second Italian edition), Zanichelli, Bologna, 2005.

Teaching methods

- - -

Assessment methods and criteria

- - -

Other information

- - -